refactor: remove deployment.json and use direct selectors

- Remove deployment.json file generation from outputs.nix
- Add throw for deprecated deployment.file usage with upgrade instructions
- Remove vars data from deployment.data
- Update Machine class to use direct select() calls instead of deployment property
- Update all deployment property accesses to use direct selectors
- Add precaching for frequently accessed values in update.py:
  - Module paths for facts and vars
  - Deployment settings (requireExplicitUpdate, nixosMobileWorkaround)
  - Services and generators data
  - Secret upload locations
- This removes unnecessary JSON serialization and makes the code more composable

nixosModules/clanCore/vars/secret/password-store.nix

@@ -64,8 +64,6 @@ in
     };
   };
   config = {
-    system.clan.deployment.data.password-store.secretLocation =
-      config.clan.vars.password-store.secretLocation;
     clan.core.vars.settings =
       lib.mkIf (config.clan.core.vars.settings.secretStore == "password-store")
         {